plantsT logo
Home  |  Search  |  Families  |  ICP  |  Papers  |  Site Map  | 

CHX27
(Best curated entry)

General   |   RNA/DNA   |   Citations   |   Mutants   |   XML Login
General Information  
Name: CHX27
PlantsT ID: 27135
Species: Arabidopsis thaliana (mouse-ear cress)
Synonyms: Model.28633, CHR5v01212004, Locus.29482, At5g01690, 68172.m00069, F7A7_210.
Keywords: arabidopsis-genome7, chx, uniporter, cpa2, monovalent cation proton antiporter, 2.a.37.
Description: CHX27 cation/proton exchanger

Electrochemical Potential-driven Transporters - Class 3-- Secondary carrier-type facilitators. Transport systems are included in this category if they utilize a carrier-mediated process to catalyze uniport (a single species is transported by facilitated diffusion in a process not coupled to the utilization of a primary source of energy), antiport (two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy) and/or symport (two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy). These systems are usually stereospecific. Solute:solute countertransport is a characteristic feature of secondary carriers.

Porters(uniporters,symporters,antiporters)-- Transport systems are included in this subclass if they utilize a carrier-mediated process to catalyze uniport (a single species is transported either by facilitated diffusion or in a membrane potential-dependent process if the solute is char ged), antiport (two or more species are transported in opposite directions in a tightly coupled process, not coupled to a direct form of energy other than chemiosmotic energy) and/or symport (two or more species are transported together in th e same direction in a tightly coupled process, not coupled to a direct form of energy other than chemiosmotic energy).

2.A.37 The Monovalent Cation:Proton Antiporter-2 Family-- The CPA2 family is a moderately large family (over 100 sequenced members) from bacteria, archaea and eukaryotes. Among the functionally well-characterized members of the family are (1) the KefB/KefC K+ efflux proteins of E. coli which may be capable of catalyzing both K+/H+ antiport and K+ uniport, depending on conditions (Bakker et al., 1987; Booth et al., 1996; Munro et al., 1991), (2) the Na+/H+ antiporter of Enterococcus hirae(Waser et al., 1992) and (3) the K+/H+ antiporter of S. cerevisiae. It has been proposed that under normal physiological conditions, these proteins may function by essentially the same mechanism (Reizer et al., 1992). KefC and KefB of E. coli are responsible for glutathione-gated K+ efflux (Ferguson et al., 1993, 1997). Each of these proteins consists of a transmembrane hydrophobic N-terminal domain, and a less well-conserved C-terminal hydrophilic domain. Each protein interacts with a second protein encoded by genes that overlap the gene encoding the primary transporter. The KefC ancillary protein is YabF while the KefB ancillary protein is YheR. These ancillary proteins stimulate transport activity about 10-fold (Miller et al., 2000). These proteins are important for cell survival during exposure to toxic metabolites, possibly because they can release K+, allowing H+ uptake. Activation of the KefB or KefC K+ efflux system only occurs in the presence of glutathione and a reactive electrophile such as methylglyoxal or N-ethylmaleimide. Formation of the methylglyoxal-glutathione conjugate, S-lactoylglutathione, is catalyzed by glyoxalase I, and S-lactoylglutathione activates KefB and KefC (MacLean et al., 1998). H+ uptake (acidification of the cytoplasm) accompanying or following K+ efflux may serve as a further protective mechanism against electrophile toxicity (Booth et al., 1996; Ferguson et al., 1993, 1997; Stumpe et al., 1996).

Families  
Families and groups to which
this sequence belongs:
Transporter Classification  (3665 members)
Electrochemical Potential-driven Transporters - Class 3  (2109 members)
Porters(uniporters,symporters,antiporters)  (2109 members)
2.A.37 The Monovalent Cation:Proton Antiporter-2 Family  (65 members)

This protein is part of the following alignment(s):
View alignment 2.A.37
MSF format HTML format Define HTML options yourself Jalview
Protein  
Protein Features: Protein 218197 Feature: 27722, Method: TMHMM 37-59 Potential transmembrane helix domain Feature: 22080, Method: TMpred 41-60 Potential transmembrane spanning region Feature: 22080, Method: TMpred 62-83 Potential transmembrane spanning region Feature: 27722, Method: TMHMM 66-83 Potential transmembrane helix domain Feature: 27722, Method: TMHMM 93-115 Potential transmembrane helix domain Feature: 22080, Method: TMpred 98-119 Potential transmembrane spanning region Feature: 22080, Method: TMpred 132-154 Potential transmembrane spanning region Feature: 27722, Method: TMHMM 132-154 Potential transmembrane helix domain Feature: 27722, Method: TMHMM 169-191 Potential transmembrane helix domain Feature: 27722, Method: TMHMM 203-225 Potential transmembrane helix domain Feature: 22080, Method: TMpred 288-307 Potential transmembrane spanning region Feature: 27722, Method: TMHMM 288-310 Potential transmembrane helix domain Feature: 27722, Method: TMHMM 330-352 Potential transmembrane helix domain Feature: 22080, Method: TMpred 345-365 Potential transmembrane spanning region Feature: 27722, Method: TMHMM 381-400 Potential transmembrane helix domain Feature: 22080, Method: TMpred 382-400 Potential transmembrane spanning region
1. Potential transmembrane helix domain (TMHMM)
2. Potential transmembrane spanning region (TMpred)



Protein Sequence:
  1 MENITKTFQY GGVDWLCEPW VGAGSLGIGR GENPLKFALP LLLLQISVFS IFSVSFQFLL
 61 RPFGKFAFLT QMLAGICLGP SVIGRNKQYM ATFFYARSVY IIESFEAICF LFICYITTCQ
121 VDTRMIKRVG KLAFINGILL FLIPFVWGQF AAILISKRLK SGPAGIPPVE FHHVAIVQST
181 MFFQVVYGVL SSLKMLNTEP GRLALASMMV HDCLSWCFFM LNIAIKLNVD LPNKNRAAFL
241 SVLQTEMNAD DNDIGDSICV PTTNAVDEES NTRRTLSQGL LSLCYMRLAL HLLPLGRICG
301 FTLLLWCGRL RSSHPKTSAS RHGTVRQNRF AKMIAIALPS LYYKVPLWHA ILVGFIVNIQ
361 GLYDVQIYKQ NFNYTKISSK SFGAMVMSAT VNSTIFIVIV KKLYQTMSKR NPYKRRTVQH
421 CRVEAPLRIL TCFRNREAVR PVLDLVELSR PAIGSPLSVF AVNLEELNNH SLPLLIHHTQ
481 EISPFLVPSR RDQIVKAFHN FEKTNQETVL IECFTAVAPR KTMHEDVCAI AFDQETDIVI
541 LTLDAGIELW ERLLCRNLLH NCPCSVALFI DRGRLPDFRF VPLKKLTINI GAIFLGGPDD
601 REMLAYATRL ASHPSVELQV FRLVDQNGVS PLRDMVERNH DMRVINVFRK ENSEKNIIFR
661 EVRIEEAVNL LDLLRKEGDD FDLMMVGIRH EENLLMLEGL SEWSDMKELG EVGDVLISKD
721 LELSVSVLAV QQ

View this sequence in FASTA format
BLAST this sequence against our PlantsT databases
Length: 732 amino acids
Molecular Weight: 82925.10 Da
Gene Expression Data  
Microarray Data in Different Organs
and at Different Ages
(click on graph to view data)

Data downloaded from genevestigator
      
Microarray Data
(Click on graph to view legend)

Images provided by John Ward at AMPL.
Data set 1 unavailable for AT5G01690

Data set 2 unavailable for AT5G01690

Data set 3 unavailable for AT5G01690
Protein History and Links to Sources  
Main Entry: CHX27 ID:27135 CHX27 cation/proton exchanger
is linked to these entries:
Current Entry:
PROTEIN: CHX27 DNA: CHX27 RNA: CHX27
TAIR7:At5g01690.1 TAIR7:At5g01690.1 At-genome:At5g01690
Superceded Entry:
PROTEIN: CHX27 DNA: CHX27 RNA: CHX27
At-genome:At5g01690 At-genome:At5g01690 At-genome:At5g01690
GenBank-P:NP_195789
GenBank-P:T48190
GenBank-P:CAB82285
Strain   
At5g01690: Order strain
External Resources   
At5g01690
The Institute for Genomics Research  TIGR The Arabidopsis Information Resource  TAIR The Arabidopsis Information Resourceprotein  TAIR Salk Institute Genomic Analysis LaboratoryGENE  SIGNAL Salk Institute Genomic Analysis LaboratoryGENE  SIGNAL AtEnsemble at Nottingham Arabidopsis Stock Centregene  NASC AtEnsembl at Nottingham Arabidopsis Stock Centregene  NASC
Massively Parallel Signature SequencingGene  MPSS Arabidopsis thaliana Plant Genome Database  ATGDB Arabidopsis thaliana Plant Genome Database  ATGDB SubCellular Proteomic Database (SUBA)- Univ. of Western Australia  UWA Plant membrane protein database  ARAMEMNON The Institute for Genomic Research  TIGR ATIDB
Community  
Community Annotations: annotate Annotate this entry
Chronology  
Created: 2007-08-30
Revision: 14 September 2007 YL - Merged 218200(AT5G01690.1)
23 January 2002 JT - Updated Annotation
  favoriteAdd to your list of favorites
 

A distributed project investigating gene networks that control uptake and accumulation of plant nutrients and toxic metals. Funded by the plant genome program of the National Science Foundation (DBI-0077378). Any opinions, findings, and conclusions or recommendations expressed in this material are those of the authors and do not necessarily reflect the views of the National Science Foundation.

Questions or comments? Please contact us.

© 2005 Purdue University
portions © 2000-2004, Regents of University of California