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CHX28
(Best curated entry)

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General Information  
Name: CHX28
PlantsT ID: 27129
Species: Arabidopsis thaliana (mouse-ear cress)
Synonyms: Locus.13853, CHR3v01212004, Model.20016, At3g52080, 68173.m04279, F4F15_190.
Keywords: arabidopsis-genome7, chx, uniporter, cpa2, monovalent cation proton antiporter, 2.a.37.
Description: CHX28 cation/proton exchanger

Electrochemical Potential-driven Transporters - Class 3-- Secondary carrier-type facilitators. Transport systems are included in this category if they utilize a carrier-mediated process to catalyze uniport (a single species is transported by facilitated diffusion in a process not coupled to the utilization of a primary source of energy), antiport (two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy) and/or symport (two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy). These systems are usually stereospecific. Solute:solute countertransport is a characteristic feature of secondary carriers.

Porters(uniporters,symporters,antiporters)-- Transport systems are included in this subclass if they utilize a carrier-mediated process to catalyze uniport (a single species is transported either by facilitated diffusion or in a membrane potential-dependent process if the solute is char ged), antiport (two or more species are transported in opposite directions in a tightly coupled process, not coupled to a direct form of energy other than chemiosmotic energy) and/or symport (two or more species are transported together in th e same direction in a tightly coupled process, not coupled to a direct form of energy other than chemiosmotic energy).

2.A.37 The Monovalent Cation:Proton Antiporter-2 Family-- The CPA2 family is a moderately large family (over 100 sequenced members) from bacteria, archaea and eukaryotes. Among the functionally well-characterized members of the family are (1) the KefB/KefC K+ efflux proteins of E. coli which may be capable of catalyzing both K+/H+ antiport and K+ uniport, depending on conditions (Bakker et al., 1987; Booth et al., 1996; Munro et al., 1991), (2) the Na+/H+ antiporter of Enterococcus hirae(Waser et al., 1992) and (3) the K+/H+ antiporter of S. cerevisiae. It has been proposed that under normal physiological conditions, these proteins may function by essentially the same mechanism (Reizer et al., 1992). KefC and KefB of E. coli are responsible for glutathione-gated K+ efflux (Ferguson et al., 1993, 1997). Each of these proteins consists of a transmembrane hydrophobic N-terminal domain, and a less well-conserved C-terminal hydrophilic domain. Each protein interacts with a second protein encoded by genes that overlap the gene encoding the primary transporter. The KefC ancillary protein is YabF while the KefB ancillary protein is YheR. These ancillary proteins stimulate transport activity about 10-fold (Miller et al., 2000). These proteins are important for cell survival during exposure to toxic metabolites, possibly because they can release K+, allowing H+ uptake. Activation of the KefB or KefC K+ efflux system only occurs in the presence of glutathione and a reactive electrophile such as methylglyoxal or N-ethylmaleimide. Formation of the methylglyoxal-glutathione conjugate, S-lactoylglutathione, is catalyzed by glyoxalase I, and S-lactoylglutathione activates KefB and KefC (MacLean et al., 1998). H+ uptake (acidification of the cytoplasm) accompanying or following K+ efflux may serve as a further protective mechanism against electrophile toxicity (Booth et al., 1996; Ferguson et al., 1993, 1997; Stumpe et al., 1996).

Families  
Families and groups to which
this sequence belongs:
Transporter Classification  (3665 members)
Electrochemical Potential-driven Transporters - Class 3  (2109 members)
Porters(uniporters,symporters,antiporters)  (2109 members)
2.A.37 The Monovalent Cation:Proton Antiporter-2 Family  (65 members)

This protein is part of the following alignment(s):
View alignment 2.A.37
MSF format HTML format Define HTML options yourself Jalview
Protein  
Protein Features: Protein 216992 Feature: 22080, Method: TMpred 24-42 Potential transmembrane spanning region Feature: 27722, Method: TMHMM 27-44 Potential transmembrane helix domain Feature: 52431, Method: hmmpfam (HMMER2.1.1) 30-420 Sodium/hydrogen exchanger family Feature: 27722, Method: TMHMM 83-105 Potential transmembrane helix domain Feature: 27722, Method: TMHMM 112-131 Potential transmembrane helix domain Feature: 22080, Method: TMpred 117-135 Potential transmembrane spanning region Feature: 27722, Method: TMHMM 141-163 Potential transmembrane helix domain Feature: 22080, Method: TMpred 143-164 Potential transmembrane spanning region Feature: 27722, Method: TMHMM 176-198 Potential transmembrane helix domain Feature: 22080, Method: TMpred 179-201 Potential transmembrane spanning region Feature: 22080, Method: TMpred 212-232 Potential transmembrane spanning region Feature: 27722, Method: TMHMM 218-240 Potential transmembrane helix domain Feature: 27722, Method: TMHMM 252-271 Potential transmembrane helix domain Feature: 22080, Method: TMpred 253-271 Potential transmembrane spanning region Feature: 27722, Method: TMHMM 275-292 Potential transmembrane helix domain Feature: 22080, Method: TMpred 304-324 Potential transmembrane spanning region Feature: 27722, Method: TMHMM 304-326 Potential transmembrane helix domain Feature: 27722, Method: TMHMM 341-363 Potential transmembrane helix domain Feature: 22080, Method: TMpred 347-367 Potential transmembrane spanning region Feature: 27722, Method: TMHMM 401-423 Potential transmembrane helix domain Feature: 22080, Method: TMpred 403-423 Potential transmembrane spanning region
1. Potential transmembrane spanning region (TMpred)
2. Potential transmembrane helix domain (TMHMM)
3. Sodium/hydrogen exchanger family (hmmpfam (HMMER2.1.1))



Protein Sequence:
  1 MNSTTTKNVC GDKWYLNLDR PEEALKILVF IAIFVVRTLL HYLMKPLGQP YLTTDFAIGL
 61 ILGNIPRFRG AFSGPYSITL NNIIEFGMIC HMFVMGLEMN PSVLLRPPTK DAFIAYTSMI
121 TTFVLAFVTT PFLHYTKTSP YIFSLALSLM ASSTGSPILT RVIANLKIRK SDLGKLASAA
181 GVHTDMISTL LYCFGFIFFP TEKPLARPLH RFFRALLMFC LFLAQVTFTS IVSPIFLNWV
241 NNENPEGKPL KGSHLVMSLA FVVLICSFPT WPPESMYNPI LSAFTAGLFL PNKGRMSKWI
301 INKINYLLST VFYPIFFFWV GFIIHMRNFD ITDKMAWVRF FSLLGTVIAG KVTGTVLCGL
361 LLGYHVPETA SLGLLLTTKG HFHVYLAALA IRTNRVKSTT GALIIFIIVF TVVYSPFVVM
421 DIIKRARKRV PVHIMALQWL DPTTELRILI GLHGPHNIGS TLNVMEICHG GREPGSIFYA
481 TDMVELTDEI AATLKKGGGA GQSNDSVTVT DRSVTEMRES ITAAVNGYGE LRNGQGVTVR
541 RMLALSTFVT MAHDVCGLAD ELMVSIIILP FHKRLNPDGT LDAGHAGFRH VNRKILKNAP
601 CSVGILVDRS FGQTEEAWRP GASMGIAIIF IGGRDDREAL AFAAQVARHP AVKLKVIRFL
661 EDKSSQNAQK RSSILNRASV VDQEEEMKLD DECFAEFYER YIAGGGRVSY MEKHLTNSSE
721 TFTALKSLDG EYGLVIVGRG GGRASSGLTT GLNDWQQCPE LGPIGDVLSG SDFSHNTSML
781 IIQQQRTRGQ LEGLHDDFTI L

View this sequence in FASTA format
BLAST this sequence against our PlantsT databases
Length: 801 amino acids
Molecular Weight: 88723.61 Da
Gene Expression Data  
Microarray Data in Different Organs
and at Different Ages
(click on graph to view data)

Data downloaded from genevestigator
      
Microarray Data
(Click on graph to view legend)

Images provided by John Ward at AMPL.
Data set 1 unavailable for AT3G52080

Data set 2 unavailable for AT3G52080

Data set 3 unavailable for AT3G52080
Protein History and Links to Sources  
Main Entry: CHX28 ID:27129 CHX28 cation/proton exchanger
is linked to these entries:
Current Entry:
PROTEIN: CHX28 DNA: CHX28 RNA: CHX28
TAIR7:At3g52080.1 TAIR7:At3g52080.1 At-genome:At3g52080
Superceded Entry:
PROTEIN: CHX28 DNA: CHX28 RNA: CHX28
At-genome:At3g52080 At-genome:At3g52080 At-genome:At3g52080
GenBank-P:NP_190776
GenBank-P:T49087
GenBank-P:CAB41328
Strain   
At3g52080: Order strain
External Resources   
At3g52080
The Institute for Genomics Research  TIGR The Arabidopsis Information Resource  TAIR The Arabidopsis Information Resourceprotein  TAIR Salk Institute Genomic Analysis LaboratoryGENE  SIGNAL Salk Institute Genomic Analysis LaboratoryGENE  SIGNAL AtEnsemble at Nottingham Arabidopsis Stock Centregene  NASC AtEnsembl at Nottingham Arabidopsis Stock Centregene  NASC
Massively Parallel Signature SequencingGene  MPSS Arabidopsis thaliana Plant Genome Database  ATGDB Arabidopsis thaliana Plant Genome Database  ATGDB SubCellular Proteomic Database (SUBA)- Univ. of Western Australia  UWA Plant membrane protein database  ARAMEMNON The Institute for Genomic Research  TIGR ATIDB
Community  
Community Annotations: annotate Annotate this entry
Chronology  
Created: 2007-08-29
Revision: 14 September 2007 YL - Merged 216995(AT3G52080.1)
23 January 2002 JT - Updated Annotation
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A distributed project investigating gene networks that control uptake and accumulation of plant nutrients and toxic metals. Funded by the plant genome program of the National Science Foundation (DBI-0077378). Any opinions, findings, and conclusions or recommendations expressed in this material are those of the authors and do not necessarily reflect the views of the National Science Foundation.

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