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CHX2
(Best curated entry)

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General Information  
Name: CHX2
PlantsT ID: 27117
Species: Arabidopsis thaliana (mouse-ear cress)
Synonyms: Locus.7575, CHR1v01212004, Model.4092, At1g79400, 68170.m06635, T8K14_18.
Keywords: arabidopsis-genome7, chx, uniporter, cpa2, monovalent cation proton antiporter, 2.a.37.
Description: CHX2 cation/proton exchanger

Electrochemical Potential-driven Transporters - Class 3-- Secondary carrier-type facilitators. Transport systems are included in this category if they utilize a carrier-mediated process to catalyze uniport (a single species is transported by facilitated diffusion in a process not coupled to the utilization of a primary source of energy), antiport (two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy) and/or symport (two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy). These systems are usually stereospecific. Solute:solute countertransport is a characteristic feature of secondary carriers.

Porters(uniporters,symporters,antiporters)-- Transport systems are included in this subclass if they utilize a carrier-mediated process to catalyze uniport (a single species is transported either by facilitated diffusion or in a membrane potential-dependent process if the solute is char ged), antiport (two or more species are transported in opposite directions in a tightly coupled process, not coupled to a direct form of energy other than chemiosmotic energy) and/or symport (two or more species are transported together in th e same direction in a tightly coupled process, not coupled to a direct form of energy other than chemiosmotic energy).

2.A.37 The Monovalent Cation:Proton Antiporter-2 Family-- The CPA2 family is a moderately large family (over 100 sequenced members) from bacteria, archaea and eukaryotes. Among the functionally well-characterized members of the family are (1) the KefB/KefC K+ efflux proteins of E. coli which may be capable of catalyzing both K+/H+ antiport and K+ uniport, depending on conditions (Bakker et al., 1987; Booth et al., 1996; Munro et al., 1991), (2) the Na+/H+ antiporter of Enterococcus hirae(Waser et al., 1992) and (3) the K+/H+ antiporter of S. cerevisiae. It has been proposed that under normal physiological conditions, these proteins may function by essentially the same mechanism (Reizer et al., 1992). KefC and KefB of E. coli are responsible for glutathione-gated K+ efflux (Ferguson et al., 1993, 1997). Each of these proteins consists of a transmembrane hydrophobic N-terminal domain, and a less well-conserved C-terminal hydrophilic domain. Each protein interacts with a second protein encoded by genes that overlap the gene encoding the primary transporter. The KefC ancillary protein is YabF while the KefB ancillary protein is YheR. These ancillary proteins stimulate transport activity about 10-fold (Miller et al., 2000). These proteins are important for cell survival during exposure to toxic metabolites, possibly because they can release K+, allowing H+ uptake. Activation of the KefB or KefC K+ efflux system only occurs in the presence of glutathione and a reactive electrophile such as methylglyoxal or N-ethylmaleimide. Formation of the methylglyoxal-glutathione conjugate, S-lactoylglutathione, is catalyzed by glyoxalase I, and S-lactoylglutathione activates KefB and KefC (MacLean et al., 1998). H+ uptake (acidification of the cytoplasm) accompanying or following K+ efflux may serve as a further protective mechanism against electrophile toxicity (Booth et al., 1996; Ferguson et al., 1993, 1997; Stumpe et al., 1996).

Families  
Families and groups to which
this sequence belongs:
Transporter Classification  (3665 members)
Electrochemical Potential-driven Transporters - Class 3  (2109 members)
Porters(uniporters,symporters,antiporters)  (2109 members)
2.A.37 The Monovalent Cation:Proton Antiporter-2 Family  (65 members)

This protein is part of the following alignment(s):
View alignment 2.A.37
MSF format HTML format Define HTML options yourself Jalview
Protein  
Protein Features: Protein 214584 Feature: 22080, Method: TMpred 18-40 Potential transmembrane spanning region Feature: 27722, Method: TMHMM 22-40 Potential transmembrane helix domain Feature: 52431, Method: hmmpfam (HMMER2.1.1) 27-412 Sodium/hydrogen exchanger family Feature: 27722, Method: TMHMM 47-64 Potential transmembrane helix domain Feature: 22080, Method: TMpred 48-67 Potential transmembrane spanning region Feature: 27722, Method: TMHMM 79-101 Potential transmembrane helix domain Feature: 27722, Method: TMHMM 114-136 Potential transmembrane helix domain Feature: 22080, Method: TMpred 121-141 Potential transmembrane spanning region Feature: 22080, Method: TMpred 145-165 Potential transmembrane spanning region Feature: 27722, Method: TMHMM 146-168 Potential transmembrane helix domain Feature: 27722, Method: TMHMM 181-203 Potential transmembrane helix domain Feature: 22080, Method: TMpred 194-214 Potential transmembrane spanning region Feature: 27722, Method: TMHMM 208-230 Potential transmembrane helix domain Feature: 27722, Method: TMHMM 243-265 Potential transmembrane helix domain Feature: 22080, Method: TMpred 247-265 Potential transmembrane spanning region Feature: 179093, Method: hmmpfam (HMMER2.3.2) 272-454 Bacitracin resistance protein BacA Feature: 27722, Method: TMHMM 294-316 Potential transmembrane helix domain Feature: 27722, Method: TMHMM 323-345 Potential transmembrane helix domain Feature: 22080, Method: TMpred 324-343 Potential transmembrane spanning region Feature: 27722, Method: TMHMM 355-374 Potential transmembrane helix domain Feature: 22080, Method: TMpred 391-411 Potential transmembrane spanning region Feature: 27722, Method: TMHMM 394-411 Potential transmembrane helix domain
1. Potential transmembrane spanning region (TMpred)
2. Potential transmembrane helix domain (TMHMM)
3. Sodium/hydrogen exchanger family (hmmpfam (HMMER2.1.1))
4. Bacitracin resistance protein BacA (hmmpfam (HMMER2.3.2))



Protein Sequence:
  1 MDPKLLLCLP QGDELFNPLN TMFIQMACIL VFSQLFYLLL KPCGQAGPVA QILAGIVLSP
 61 VLLSRIPKVK EFFLQKNAAD YYSFFSFALR TSFMFLIGLE VDLHFMRRNF KKAAVITLSS
121 FVVSGLLSFA SLMLFIPLFG IKEDYFTFFL VLLVTLSNTA SPVVVRSIAD WKLNTCEIGR
181 LTISCALFIE LTNVVLYTII MAFISGTIIL ELFLFLLATV ALILINMVLA PWLPKRNPKE
241 KYLSKAETLV FFIFLLIIGI TIESYDVNSS VSVFAIGIMF PRQGKTHRTL IQRLSYPIHE
301 FVLPVYFGYI GFRFSIIALT KRFYLGIVII VIVTIAGKFI GVISACMYLK IPKKYWLFLP
361 TILSVKGHVG LLLLDSNYSE KKWWTTTIHD MMVAALVITT LVSGVLASFL LKTREKDFAY
421 EKTSLESHNT NEELRILSCA YGVRHARGAI SLVSALSGSR GASDPFTPLL MHLVPLPKKR
481 KSELMYHEHD EDGGNANGDD EFGTNEGLEI NDSIDSFAKD SKILIQQVKL VTQMLNMHEE
541 ICNATEDLRV SIVFLPFHKH QRIDGKTTND GELFRQMNRN VLRHGPCSIG IFVDRNITGF
601 QQPHGFDSVQ HVATLFFGGP DDREALALCR WLANNTLIHL TVIQFVSEES KAETPVGNAM
661 TRDNNEVFME VLGRNQTEQE TDRSFLEEFY NRFVTTGQVG FIEKLVSNGP HTLTILREIG
721 EMYSLFVVGK STGDCPMTVR MKDWEECPEL GTVGDFLASS LDVNASVLVV QRQRHSHDSF
781 IDD

View this sequence in FASTA format
BLAST this sequence against our PlantsT databases
Length: 783 amino acids
Molecular Weight: 88200.86 Da
Gene Expression Data  
Microarray Data in Different Organs
and at Different Ages
(click on graph to view data)

Data downloaded from genevestigator
      
Microarray Data
(Click on graph to view legend)

Images provided by John Ward at AMPL.
Data set 1 unavailable for AT1G79400

Data set 2 unavailable for AT1G79400

Data set 3 unavailable for AT1G79400
Protein History and Links to Sources  
Main Entry: CHX2 ID:27117 CHX2 cation/proton exchanger
is linked to these entries:
Current Entry:
PROTEIN: CHX2 DNA: CHX2 RNA: CHX2
TAIR7:At1g79400.1 TAIR7:At1g79400.1 At-genome:At1g79400
Superceded Entry:
PROTEIN: CHX2 DNA: CHX2 RNA: CHX2
At-genome:At1g79400 At-genome:At1g79400 At-genome:At1g79400
GenBank-P:NP_178058
GenBank-P:AAD30236
Strain   
At1g79400: Order strain
External Resources   
At1g79400
The Institute for Genomics Research  TIGR The Arabidopsis Information Resource  TAIR The Arabidopsis Information Resourceprotein  TAIR Salk Institute Genomic Analysis LaboratoryGENE  SIGNAL Salk Institute Genomic Analysis LaboratoryGENE  SIGNAL AtEnsemble at Nottingham Arabidopsis Stock Centregene  NASC AtEnsembl at Nottingham Arabidopsis Stock Centregene  NASC
Massively Parallel Signature SequencingGene  MPSS Arabidopsis thaliana Plant Genome Database  ATGDB Arabidopsis thaliana Plant Genome Database  ATGDB SubCellular Proteomic Database (SUBA)- Univ. of Western Australia  UWA The Institute for Genomic Research  TIGR ATIDB Plant membrane protein database  ARAMEMNON
Community  
Community Annotations: annotate Annotate this entry
Chronology  
Created: 2007-08-28
Revision: 14 September 2007 YL - Merged 214587(AT1G79400.1)
23 January 2002 JT - Updated Annotation
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A distributed project investigating gene networks that control uptake and accumulation of plant nutrients and toxic metals. Funded by the plant genome program of the National Science Foundation (DBI-0077378). Any opinions, findings, and conclusions or recommendations expressed in this material are those of the authors and do not necessarily reflect the views of the National Science Foundation.

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